r.li.shape - GRASS GIS manual

NAME

r.li.shape - Calculates shape index on a raster map

KEYWORDS

raster, landscape structure analysis, patch index

SYNOPSIS

r.li.shape

r.li.shape --help

r.li.shape input=name config=name output=name [--overwrite] [--help] [--verbose] [--quiet] [--ui]

Flags:

--overwrite: Allow output files to overwrite existing files
--help: Print usage summary
--verbose: Verbose module output
--quiet: Quiet module output
--ui: Force launching GUI dialog

Parameters:

input=name [required]: Name of input raster map
config=name [required]: Configuration file
output=name [required]: Name for output raster map

DESCRIPTION
NOTES
EXAMPLES
SEE ALSO
REFERENCES
AUTHORS

DESCRIPTION

r.li.shape calculates the landscape shape index as:

LSI = 0.25 * E / sqrt(A)

with:

E: sum of all edges
A: sum of all patch areas

Do not use absolute path names for the config and output file/map parameters. If the "moving window" method was selected in g.gui.rlisetup, then the output will be a raster map, otherwise an ASCII file will be generated in the folder C:\Users\userxy\AppData\Roaming\GRASS7\r.li\output\ (MS-Windows) or $HOME/.grass7/r.li/output/ (GNU/Linux).

If the input raster map contains only NULL values then r.li.shape returns NULL.

EXAMPLES

To calculate the shape index on map my_map, using my_conf configuration file (previously defined with g.gui.rlisetup) and saving results in my_out, run:

r.li.shape input=my_map conf=my_conf output=my_out

Forest map (Spearfish sample dataset) example:

g.region raster=landcover.30m -p
r.mapcalc "forests = if(landcover.30m >= 41 && landcover.30m <= 43,1,null())"
r.li.shape input=forests conf=movwindow7 out=forests_shape_mov7
r.univar forests_shape_mov7

Forest map (North Carolina sample dataset) example:

g.region raster=landclass96 -p
r.mapcalc "forests = if(landclass96 == 5, 1, null() )"
r.li.shape input=forests conf=movwindow7 out=forests_shape_mov7

# verify
r.univar forests_shape_mov7
r.to.vect input=forests output=forests type=area
d.mon wx0
d.rast forests_shape_mov7
d.vect forests type=boundary

REFERENCES

McGarigal, K., and B. J. Marks. 1995. FRAGSTATS: spatial pattern analysis program for quantifying landscape structure. USDA For. Serv. Gen. Tech. Rep. PNW-351. (PDF)

AUTHORS

Claudio Porta and Lucio Davide Spano, students of Computer Science University of Pisa (Italy).
Commission from Faunalia Pontedera (PI) (www.faunalia.it)

SOURCE CODE

Available at: r.li.shape source code (history)

Latest change: Monday Nov 18 20:15:32 2019 in commit: 1a1d107e4f6e1b846f9841c2c6fabf015c5f720d